HapFlow

Visualising haplotypes in sequencing data.

If you use HapFlow in a paper please cite. 

 HapFlow: visualizing haplotypes in sequencing data
MJ Sullivan, NL Bachmann, P Timms, A Polkinghorne
Bioinformatics, btv551.
HapFlow uses pysam to create the flow file so you should also cite:
pysam
samtools

Email: mjsull@gmail.com