Block details
fasta C_difficile_CD00121_1A_020916.fasta
contig u00000crpx_c_020916
start 3823665
length 13612
strand +
type noncore
seq cacatgtgtcgttactactatcggaacacattttatcaacctcgttgctgtcatgtgaac
acaattcattagtcctatgccgtcctcttgcatttttcctttgtgttttaaatttagcac
catctacgctattcttcaagcctgttttataaacaaaggtcaactgtgcagggtcaacat
ttccgttttcatcaagtccacctacaattactttttcaacaatgctttcaaacacatagc
ggtcaaatttatcaagaacctcattctgttccagagttttcttaaactctttcaaacgtt
tttttatgtctttctcattatcagaagtttcttgtaacttttgtctttcttcaacaagct
gttcttgtttacttactaaatcagcatatttactttcgtaggtttccttatcaataattt
cttccagacgcatatccacaagtttactttttttcttctctaatgcgtctatctcctttt
ccgcttttgcaagttgttttgacaccacactactactaagagtatcgtccattctctgca
aaaattcttccagaacatctttattatcatcacataataaacgataactttctacaaatg
cttcttcaatagctgtttctggaatacctttgctatgtttacaaaatttctttcctttct
tcgtagccgttacacattgccatataaccttgctgtattttgagccactgtgccaattac
gtcttgttaaagtaccaccacaaaagccacattctagcatacagctaaatgcgtatttcc
tgctatacttctcacgcttaccgctgcctaccgttgttcggttcttatttctccgattaa
gaatttcctgtgctttttcaaaaacttcttcactaataatcggctcatggtgatctttca
tataaaatttatcttcttcacccatgttttcaaggcgacgtttggaaatcggatcaacag
taaaagttttgcctaagagtatatcacccttgtatttctcattcttaataattccaataa
ccgtagatggtgcccatgtggaactcccatacttcgttttataacctagactttcaagct
cctgtccaataacagaaccaccagcaccatcaacataacggttgaaaatatatctgacaa
tctctgcttcttcttgatttacagttattgtcttatcctctgggtgataatcatatccaa
tacaaccttgaaaacctaccagctcgccgcgcttcattttcattttcaacccttttttta
cattggctgaaatgttctcgacttcctgctgtgcaacagaactaagaacaacaagcaata
actctccatccattgtaagtgtattgattttttcatcttcaaaataaacggcgatatttc
tctcttttagcatacgaacatatttcaatgtgtctaaagtatttctggcaaatcttgata
tggattttgtaaataccatgtcaatttcaccattcatacagtcatttatcatacgctgaa
aatcttctcgttttgttacttgtgtccccgtaattgcttcatcagcataaatgtcagcta
acacccattccttgtttttcttaatcatgtcagtataatactgaacttgtgatttataac
tgtttaactgatcttcgctatctgtacttacacggcaatatgcagctacacgcaaacgct
caatggcttttccacgggcttgtcttgccaaaacattttttgcttttattacttcaactt
cctgcatagtacacctccttattttgtgttcctttcatattgttattgtactactttaaa
aaacacaattcaagcagttatgtcagaaagcaccttatagtctttcatcagcctttgttt
tacaagagtgtattctttttcagaaatcagtttacgggcaagcagttgttttaacatagc
aatttgcatactatacctaattatattattcattaaaaccctccttgcttttttatttat
ggaagtaatcagacggcttcggcagctccactggactttcaccattcccattctgatggg
tgaaccgtgtcatacgggtgtatcattattcagatatacgagtcatggcagcaacctttc
caaagatcgcttgcggttcactggcataatcgctcgctgctttccccatttcagtggtcg
tggcgttccagtccgctggctcgtcgtatatcaaacgtatctgattactgtattcacttg
tcaaagaacggaaaagagttaaaatgaggtggtagatactctctgttatatttacttcac
tttgacttcaaaccctaagattactttaatcaacgctgcccgtatcctgcctttcagttc
catatcaagcacgatatacatattcccgtgttcgtcatagaacgggcgtaggctggcttt
tgatatgtaagcgtcataatggttcaaaatcttttcaattgccacctcgttaccgtcagc
tgcagaactgatggtcgagaatgatggacacttttttgtagacttcatcatgtttttatt
cctcctcgtacatatccttaataagctttaatgtgtgcagcctgtttctacatacggaaa
atcgttccatttccataacctctgcaatttcagcgtcggtcatttcaagaaagtaggaca
taagcagaatgttacgtcggctttctgttaattctttgatagcttcacataagcgttcat
catagatatggacttctgaaccaaatacatcaaatgacgtaaactcaacgcaatattcgt
ccatggcaccgatctggtttaactccatttcagataaatcacagaacggcgtttcacgtc
ttgcacgtctgccaagctctcggtcatagttctttacagttcgtcctacaaccttgcgag
ctagacaatcaaattgaagtctgatagcgccctcgaaagaagatggtttcataatctcac
cccctttccagcgaaagttgctaaagcgaaaagacttctacctcttttcgcactaacact
caccatgaaaggtgggatttgatacccaaccgcaaaaattttttgaaaaagttttatgca
gtaaaaaagcacaagggcaatacagacgtactgatcttgtgctaaacaaattattcctgt
tatatgctgtaaaaaaccacatataggagcattatgttccgtagaatttaaatgtttttt
taatgaactaccgatggtcgaaagttgttgaatatgtaagtgtttcatacggctacccct
agagccgataaaacaagaccatccagtaatttgtccaacgttaggcaaaaataaaacggc
ggctatataaccgtcgtcttattcaaaagttcaaaaagaactaaactaaaccctctaaag
cagtatgtatttataatcagtcttgcaaaataacaaagtagaattgaaatataaggtagc
aatccttgtgcatctaataaacttataggggttacagcagaccacggaataatattttgt
atactttcagatcaatatagtccaacaaaaccaattcccgatatttagtaactaaaaagt
aaactagagtagaaaacatttctttgcaaaacacaaataataagtaatggactcattgac
aatagattgagaaatccagttttttagacttagatagattatctcacttgtaaatgattt
aagttctttgacttcatatatagcggtataatctgtcaacgtgatcattacaaaccataa
tgcctatataacatactttccaagcaaaaactttattctattagttggggaatacaaaat
atttatcattgtgcgttcaacatattctttttgtataaaaatgtaattacaaaacaccac
tcaatataagatagataataatttgaataggaattatcaatctacgtaaccattcattac
ctgtcattgttgttacaatagatttgggattctgtttccattacataatttttttatcct
tctttcagatatctcctcattttatcgaagcttcttctacagacatacattccataataa
aatctacctttgaatattatttcacgatttcgttatagacgcgtaaacaaacaataaaaa
acgaaatttcttttaagtaccataatttttatatcgaaattacaattatccacttatata
cagcatttataggtaattcaatgataaaaaaacacatactttactactaaattgccacaa
ttgaatgcgccttgatatgatagggagattccacaataaaaaactgtgcatctcccttga
ttcattcatactgatatcttatttataagactcttttgtgtctttttttggtttcatgga
ccaaaatactacattcattacaataacaatcagcaacacaactgccatagccacccaaaa
gccgatattaagaccaagccattcggtagttccaaaaagggtcatccaaagttctttcca
gttcatcattccacctccttaaagcagttctccgaaatgacggacataggctttttttaa
acttgttgccaaagtcatatacagcagaatacatggaatcagataagcaaagtatgctgc
aggcaatgcaacaaatccaagcatagttccaaacacagtaaacggaataatggtcagaac
tataattccagtcattgttagcaaagtcaccggagctgatgcacgactctgaacaaaagg
tagctttggagtacgaatcatgtgaatgactaatgtctggctccacatagattccacgaa
ccaccctgcttggaacatcccgatatactgtgcctgaagcattgccagttctgcaccgct
gaaatgagcaggcaaatcattaaataatacaccattcgatacgaacaatggacaaaatac
aaagtacataaaaatataggttgtaaaatcaaagatagaactggttggtccaatccagat
cataaaacttccaacactggaagcgtcccatttacgaggtttggtaataaactcctcatc
cacattatcccaaggaattgcagtacaggataaatcataaattaagtttagaaatataag
atgaacactcatcattggtaagaaaggtagcaaagcagatgcagcaagcactgagaacat
attgccgaagttggatgaagcagtcattttaatgtacttgatcatgttggcatatgtctt
tcgtccctcaataataccctgttccaaaaccatcagatctttttccaatagaataatgtc
agcagattcttttgccacgtccacggcggtatccaccgaaataccaatatcggcggcttt
catagctgcagcatcattaataccgtcacccatgaaaccgaccgtatgaccattttcacg
gagaacagaaaccacacgggctttctgatcaggggttagctttgcaaatacatctgtaga
ctctgccactcttgcaagctctgcatcgcccatttgttccaaatcagaaccgagaagcat
attgcgaacctctaatcccacctgcttgcagatagttcgagtcactttgtcgttgtcacc
tgtcaaaattttggttataacaccatggtctttcagagctttaatagcatccgcagtaga
ttcttttggaggatcaaggaatgccagatatccaatcagtaccatatcacactcatcttt
aacaccaaatgcgccgattggggaaggattactcttctgtgcaatagctagtacgcggaa
tcccttatcgttaagattgtccactgtctccagaattctgtaacgaacgtcatcagtcag
aggctgcactcctccattacactctgcaaacgcacaaatagagagcatttcttccacagc
accttttgttaccatctgggtcttacccttattatcctgtaccactgtagtcagacgacg
acgtgtgaagtcaaaaggaatctcatctactttcacatagttttcagacaggtcaatgag
acgcgaatctgcggcttcctcttcctccgtcttatggataattgccaaatccatcaggtt
tttatagccagtctggaagtaactattgaggtaagcgtgacgcagtactcgcgtatcgtc
ctcgccatttacattcagatggtattccagcacaaccttatcctgggtcagcgtgccagt
cttgtcagtacagagaatatcaatagcaccgaagttctgaatggaattgaggtttttaac
gattgtctgcttcttgctcatggaaacagcgcctttcgcaagacaggttgttacaatcat
cggcaacatttctggtgtcaaaccaacagcaatagaaacgccgaataagaaggccgccaa
ccaatcgcccttggtgataccattgacaaagaacaccagcggaaccataatgagcataaa
acgaatcaatacccaagaaacggcattgacacccttggtaaagcttgtttcaaccgcttc
tccagcaactgcggacgccatagagccaaacagagtatgatcgccaacacaaacaacaac
agctgttgcgctaccagaaattacattactccccataaaagcaatgtttgtgtaatcagt
cacgctttctttctgagcacttacattgggtgttttttcaataggttcactctcaccagt
aagacttgcctgactgacaaacaaatccttcgcatccaaaatacgaacatccgccggaat
catatctccagcagaaagatgcacaatatctcccaccaccaaatcatccataggaagttc
ttttttttcatagtttctacgagtaactgtacaagtggtcgtaatcatggctaacaattt
ctctgctgcatttccgcttctggattcctgtacaaaacgaagcgtaccggaaatgaatac
cattgttaaaatgattacaacagtcagggaatcaaagtcctctggcacactgccaaacag
agaaaaatacggaaaaatcatatctgtaattgtggatactaaagccagacaaaataaaat
ggcggtaaatggattgataaatgcgccaaccagtcgttttgccagagatttctttttttc
atgagtgactttattggtaccatatttagcacgacttacggatacttcatctacttctaa
gccacgaagtgtggtatgaagtttttttaaaacttctttaataggattggttgccgcaaa
ttgaatgcggcggttctgttcgtcacggatgactgctttttctacagtctgacgaatagc
catacgattttcttttttgttcattggtcttacctccttgaattttcataggggcaagga
atattatatgagcgacacggaatctccaaattctcatataatattctctgccttcgtgga
ctgacatcagagtccatgtctttcacctcacaatcttaaaaaaatatctatgtgaaacct
caatgtggattattggttgcgatagcggacacttttttcgatataccagacatcaaagcc
ggcaacaatcagccatgcgattattgcaaatacaaaccagtggtttgaaaatcccggcaa
aaatcctttcattaagaatataatcccatttaacgcaatcatttctccaacattacgaca
aagcgggacaatattaattttatctttctcctcctgcggcatatttttccacagggaaag
atgacgatatccttttccaaaggccaaccaaaagcctgcaagagtaaataaaattccaaa
aaagatacatgtaaaatccatcgtttgttcctcctttcaatgcttaaacctgtttcttag
ttttgtcagcttcagaagtttaatgaagagcacaataatagtaacagcaagaataaacca
gatcacaatactcacctgataccatatcttaaagattaccattctttgttcaaagaaatt
ccaacccaaatagctacataagattgtaaatacagggtagaaagcaaaaagaattgctcg
tttcaaatcttcgatttctctcctcactcacaacacctcccaaccagcactaatcacttc
cggaattaccaatacctgcccaacgattccttctaaaatattgtttttggattttccgac
agaacagtattctgcgacaatctcaaccttgtcaccaaccacatcaccgctttccagatt
gttcaaaaagagcgtcttacaggaattgctgttaatcagcaataagcgtatatcctgctc
tgccttttcctgacatgtaaccgaaatacgatactgcttttcagattcatcactggaagt
aattgggtgaaactttcttgcaaagggacgtagaatcaggttggaaccaattaaaatagt
agcggcggtgatcgccattgcatacattcccgtacttgcaagaattccaatcgctgcagt
acaccataaggtggcagcggtattcattccacgtactgtccctctgtccttgaaaataac
accactgcataaaaaaccaacaccggatataatactgcttccgacacggaatacctgatc
cgaaccgtagagcataggaaacaaggtaaagaaacttgtacccatgcagattaacacatt
gatacgaatacctgcaggatgaccagtcaattgccgttctaatccaataagaaatccaag
tgttaaggagagggcaattctcaaaataaaatctgtgtaaaacatatgaaacacctccct
ttaactactaacagtatataaaaaatccaaatacaatcctatggctaaagtcttgcgatt
ttcttgcgatttggtaagaaaatagacggactgaaaccgaaaatggtcttagtccgtctt
tgtcatatctgatcattaaatttgtatccaataccccagatggtcaaaatatatgtggga
caatccggagcaggttcaatcttttttcgcaacttccggataaaagccataatgttgctg
ttatccagaatataatcttcctcccatacggcacgataaatctgttcctttgtaaaaact
tcacctttgttctggacaagaaagtacaaaatatcaaattcctttggagtcaggttgact
tcagaaccttttatcagtacttttctgcctcttggataaatttccagatcccctgccagg
attctatctgacagagtacccactggccaatcgctttcttctgatgctcctaacaataac
gaagatacctctccacgaatcatctcctgaataccagaaagtaaatccttcgcacaatca
ctgtccggtggatctcttagtagtttttctaatagccagatttcaagagccgaatccatc
ggaatataactaatattctttttcatcatgaatgcctcctcttaaatcaactcttgatat
tttttcttataaaaatatttggctactgaattcagcagcatatagagagataccaccagc
agtaaaaatacgaaataccaaagaggtaatttcgtcagtccaaacaacgacgcaccgccg
acaaatgtaagggaagtaaaagcaataatccccactagagttatagaaatgaccggtgca
gatgccctgctctggaaaaaaggaatcttggaagttcgcagaaaatgtaaaatcaaaacc
tgtgtccacatagattccaaaaaccatccagtctgaaacagtgctacatactgaagttgc
agggaaggatctgtaagctgcagataggttgcccctccacatagcatcggacataggaaa
taatacaaaaataggaaggtgacaatatcaaacagagaactgatcggtccgaaagacagc
ataaactgtctcagtgttttgccggaccagtctcttggggacagcatctcttcctcatct
acattgtcccaaggaagcacaatacacaacgtatcatacagcagattcaaaagcagaatc
tgaattgaagtcataggcaggaacggtaaaaaggcactggcacaaatgatggaaaaaata
tttccaaagttagagctagcggtgattttaatatatttcagcatattggtaaaagttttt
cgcccctccattacaccttgctccaaaacattcaagtccttttgcagcaaaaccacatcg
gcagcatcttttgctgcgtccactgccgtatctacagagattcccacatttgcttcattc
agtgccggaatgtcgttgactccatcaccaagaaatcccacggaatgaccattatcctgc
atagcagagacaagacgcaccttatgtcccggagtaagctctgcaaaaacatgagtatgt
tccacagcctttttaagttcacagtctgtcatttcatccagttgagtaccagttaagata
cgctctgtataaatacccacccggcggcaaacagacacagcaatcgctgcctggtcccct
gtcagaatcttagggataacttttaatcttttgagtgcagttacagactcctttgctgtc
tgctttggtgcatcaaagaaggatagatagccaactagagtcatgccccattcgtcatca
ggagttattttcttttgcgctcccacattttttcgtgccaccgcaatgaccttcattccg
tcctgtaacatttcacctactacagaagatacactctgtctcgcatcctgccccatgggg
agaagttttccacgatattctacatggttgcagcgtgagaatatatgttcaatatcacct
ttcataataagctgactattcccattgctatcctgtacaagtgtactgacaaacttacga
gcatagtcaaagggaatttcatcagctttttggaattttgtcagaagatttgcgtaatgg
gcttcccgccctggcatggtattgcaggcaagaatggcattatcaatggtattgcagaca
ccagaatgatagcagctattcagataagcaagatcaagaacctctgcattttcattccca
aaaatatccatataatattccagcaggatgctttcattggtaagtgttcctgttttatcc
atacaaagcacatccatgctaccaaagctctgcatggcattaatatccttgataatggtc
tgctttttgctcatagcaagacttcctttggcaaggcaggctgtaataaccataggaagc
atttccggcatcagacctacagcaactgacagggcgaaagcaaaagattccatccatttt
ccatcagtaatccccagtaatataaatacaatgggaactaatatcgccataaaacgtatc
atcacccaggcgatggaatcggctccttttttaaaggaatttttatcatcagaatccggt
ttggtaaatcctccatacagggtatctttgcctactgccagtacaatgccttcccctttt
ccactgatgactgtggttgccataaaagcgaggttttcaagctgagtcagtgtatcctgc
tctccgtaactgagttttcggcagctcttttcaatgatggcgctctcgccagtaatcgca
gcctgagagataaagagatccgtaatcttcgtcaatctgatatccgccggaacacgatca
cctgcagagaatagtacaatatcccctaccactaattcttcgccaggaatctctattaac
tttccatcacgcctcactgtgacgctttcatgaactaggcgatcaagctgagcagcagcg
ctctttgctcgcagctcctgaatcagacgaattacgccactaattacgatcatggaaaag
atgataatggcggtagtagcatttctcgcaaaattggatgctacgaaaacatccgtaaca
agagaaacaatgcccagaacaaaaagaatcacatgaaacgggttaataaatgcccgtctc
aaccgttgcatcgtcgtatcatttttccgcccattgaagctgttcgctccgtatttctcc
cgcattgaaccgatttgctcaatggataaaccatccggagatgagccaatgtctcgataa
atttctgatgttctacagtatgcgtattttttgatacgactatcaaatagtgttgctttt
gacacgaaacatcccctcctttataagtataagtaataacattttaacacagtgttctga
aaatgctatatttatattcttgcttttttcttgcaatttactttgatatggcatttttca
gctcgatcaaatccgtctcgttagggcgagataaatccttatcaaagttttcaaccattc
cttctaaatttggagcacggatggatacggcaagcattttctcatagcgctctcgcacat
aaataggcatttccccttgacacatatgagtgctgacaaacttcttcttggttttcacct
tgaccatgtatcaaatttaaatgaactacttagaaaagttgctcataataatatttgtat
tatgagtgatagaatgacaaaagtggcagtatggaaaccgagtgtaaaaacaatacaatt
agtttgtatggaatatctgaactacataattgaccactctgtaatttatgaaaaaataca
atgcgcaaattggaacgggacagaagaaaccaatagtatttttaataattccccttcacc
attgattactcttatctattcttgcgatttacaacaaaataaaacaacataaattttaaa
tacgttgactggcataattcatatgtatagtaagtctacaattaagatgcgctttttcta
atccaaatatattaagaaaaaagttttgcgaagccattaatactttgtttaagatgtctt
tcataaatataaagaataatgctcttaacaaaagcgtgcaaattcctaaagaaatgcacg
ctttcaataattatcctataatcttccaattgctctccttatgtagcactaattcaaact
gcgatacctgtgttgcctttgtctgattatcaatgaatttcacggcaaccttgactttca
cattgtccccatcaaccgtaaagatagggtttaccaattcagaatagaggtagtccctgc
cgatagactcaagcacatttccagacacatagtaagcaagctccttttctgtggctgttg
ggtatagcttaaagaaagtttccagaaatgcagtagcgtcatttatggtatccgcgtcta
cacttgcgtctgcttctggtgtctttggttcatagtctgatttctcgattgctggtgcaa
gggtagggttctgaataattaccatattcccgccagcgtccacatgaacttttacggtat
aggttgccttaaccgctgttgtctgttccccctcttttatctgctgatctacttcgtagg
tagcggaaaaagtgtccgttccagactgttcaatgctccatacaatcacatctgtaatgg
cagagctggtcggtatatccgttctaatggtatccatattcaagtcctgcaattcctttg
tcagataaccgctgattgcctgcgtccttgcgtcaatcgcttctttgctgttactccatg
tgtaataggactttgcaaaattcttcacgaaattttctatcccgttggtgtcctgcaagc
gaagctcaatcacttctttttcatgggtcgtgtgctggtcaatagcggtaaaattcttat
atactccaaagctcacgcttgcaataagcaccacccacaatgcaatcacggttttcttat
gtgtgcctaccttgacagtacgtacctttttttctttgacattttctgtctgt